PUBLICATIONS, DEPARTMENT OF BIOTECHNOLOGY:

1. Dunaeva S., Y. Osledkin (2015) Bacterial microoganisms associated with the plant tissue culture: identification and possible role (review). Agicultual Biology (Rus.), vol. 50, N 1, p.3-15.

2. Spooner, D. M., M. Ghislain, R. Simon, S. H. Jansky, and T. Gavrilenko (2014) Systematics, diversity, genetics, and evolution of wild and cultivated potatoes. Botanical Review. 80: 283-383.

3. Limantseva L., Mironenko N., Shuvalov O., Antonova O., Khiutti A., Novikova L., Afanasenko O., Spooner D., T. Gavrilenko (2014) Characterization of resistance to Globodera rostochiensis pathotype Ro1 in cultivated and wild potato species accessions. Plant Breeding (Wiley). vol. 133, issue 5, 660-665.

4. Gavrilenko T., Pendinen G., Rokka V.-M., Antonova O, R. Thieme. (2014) Intergenomic chromosome pairing in allodiploid hybrids of genus Solanum. Russian Journal of Genetics: Applied Research.

5.Gavrilenko T., O. Antonova, A. Shuvalova, E. Krylova, N. Alpatyeva, D. Spooner , L. Novikova. Genetic diversity and origin of cultivated potatoes based on plastid microsatellite polymorphism. Genetic Resources and Crop Evolution (2013) 60:1997-2015.
"Acknowledgement to the original source of publication - Springer. The final publication is available at link.springer.com”.
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6. Khiutti A., Afanasenko O., Antonova O., Shuvalov O., Novikova L., Krylova E., Chalaya N., Mironenko N., Spooner D.M., T. Gavrilenko (2012) Characterization of resistance to Synchytrium endobioticum in cultivated potato accessions from the collection of Vavilov Institute of Plant Industry (VIR) collection. Plant Breeding, 131, 744-750.

7. Pendinen G., D. M. Spooner, J. Jiang, and T. Gavrilenko (2012) Genomic in situ hybridization (GISH) reveals both auto- and allopolyploid origins of different North and Central American hexaploid potato (Solanum section Petota) species. Genome. 55: 407–415.

8. Rogozina E.V., O.Yu. Shuvalov, O.Yu. Antonova, T.A. Gavrilenko (2012) Interspecific and intraspecific diversity on resistance to Y virus in potato. Agricultural Biology (Russ), N 5, p. 64-69.

9. Shvachko N., Gavrilenko T. Cryopreservation of potato landraces using droplet-vitrification method. // In: Proceeding of COST Action 871 Cryopreservation of crop species in Europe Final meeting. Grapin A., Keller J., Lynch P., Panis B., Revilla A., Engelmann F. åds. Angers, 8-11 Feb. 2011. OPOCE, Luxembourg, P. 135-137.

10. Gavrilenko T. (2011) Application of molecular cytogenetics in fundamental and applied research of potato (Review). Chapter 9. p.184-206. In: GENETICS, GENOMICS AND BREEDING OF POTATO. 300 pages. Edit. J. Bradeen and C. Kole. Published by Science Publishers. 1 edition. USA. 2011.
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11. Chernov V.E., Pendinen G.I. Comparative evaluation of callusogenesis and regeneration in different barley species. Agricultural biology. 2011. ¹1. P.44-53.

12. Ovchinnikova A., E. Krylova, T. Gavrilenko, T. Smekalova, M. Zhuk, S. Knapp and D. M. Spooner (2011) Taxonomy of cultivated potatoes (Solanum section Petota: Solanaceae), Botanical Journal of the Linnean Society. 2011, 165, 107–155.

13. Gavrilenko T., O. Antonova, A. Ovchinnikova, L. Novikova, E. Krylova, N. Mironenko, G. Pendinen, A. Islamshina, N. Shvachko, S. Kiru, L. Kostina, O. Afanasenko, D. Spooner. A microsatellite and morphological assessment of the Russian National Potato Collection. Genetic Resources and Crop Evolution, 2010, vol.57, N 8: 1151–1164.
"Acknowledgement to the original source of publication - Springer. The final publication is available at link.springer.com”.
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14. Spooner D.M., T. Gavrilenko, S.H. Jansky, A. Ovchinnikova, E. Krylova, S. Knapp, R. Simon. Ecogeography of ploidy variation in cultivated potato (Solanum sect. Petota).
American Journal of Botany, 2010.vol. 97, N 12: 2049-2060.

15. Thieme R., E. Rakosy-Tican, M. Nachtigall, J. Schubert, T. Hammann, O. Antonova, T. Gavrilenko, U. Heimbach, T. Thieme. Characterization of the multiple resistance traits of somatic hybrids between Solanum cardiophyllum Lindl. and two commercial potato cultivars. Plant Cell Report, 2010. vol. 29: 1187-1201.

16. Pendinen G., Gavrilenko T., J.Jiang, D.Spooner, 2008. Polyploid nature of mexican wild potato species of the series Longipedicellata and Demissa. Symposium "130th birthday of G.A. Levitskiy", St.-Petersburg, Russia, 26 - 27.11.2008:P. 80-82.

17. Samatova I. S., Dunaeva S. E., Sharova E. I., Schiparyev S. M., Medvedev S. S., Gavrilenko T.A. (2009). Micropropagation and dynamics morphophysiological parameters of blackberry, raspberry and strawberry under preservation in vitro. Plant Resources. vol. 15, issue 4, p. 1-12.

18. Ovchinnikova A., Krylova E., Dorofeev V., T. Smekalova, I. Chukhina, T. Gavrilenko (2009). Type herbarium accessions of cultivated species for section Petota Dumort., genus Solanum L., from hebaria of N. I. Vavilov institute of plant industry (WIR) and V. L. Komarov Botanical institute (LE). Botanical Journal (Russ), vol. 94, N 4, p. 581-587.

19. M. Scholz, B. Ruge-Wehling, O. Schrader, A. Habekus, G. Pendinen, K. Fischer, P. Wehlin. Ryd4Hb, a novel resistance gene introgressed from Hordeum bulbosum into barley and conferring complete and dominant resistance to the barley yellow dwarf virus (BYDV-PAV). Theoretical and Applied Genetics. 2009, V.119. N 5, p.837-849

20. Pendinen G., T. Gavrilenko, J. Jiang, D. M. Spooner (2008). Allopolyploid speciation of the tetraploid Mexican potato species revealed by genomic in situ hybridization. Genome, 51, 2008: 714-720.

21. Thieme R., Rakosy-Tican E., T. Gavrilenko, O. Antonova, J. Schubert, M. Nachtigall, U. Heimbach, Th. Thieme (2008). Novel somatic hybrids (Solanum tuberosum L. + Solanum tarnii) and their fertile BC1 progenies express extreme resistance to potato virus Y and  late blight. Theoretical and Applied Genetics, 116 (5). 2008. 691-700.

22. Lupysheva Y., S. Dunaeva, G. Pendinen, L. Novikova, N.Saveljeva, L. Lutova, T. Gavrilenko (2008). Regeneration and transformation of microplants of raspberries and blackberries. Bulletin of St.-Petersburg State University. 2008. 3, 2. p.28-35.

23. Zaid A., H.G. Hughes, E. Porceddu, F. Nicholas. (2008). Biotechnology for Food and Agriculture. Translated in Russian by: Kamarova G., Gavrilenko T., Fnisimova I., Fntonova O., Kuznecova O., Kharitonov S.485–495.

24. Scholz M., B.Ruge-Wehling, A.Habekus, G.Pendinen, O.Schrader, K.Flath, E.Grose, P.Wehling The secondary genepool of barley as gene donor for crop improvement. In:Crop Wild Relative Conservation and Use. Maxted N, Ford-Lloyd BV, Kell SP, Iriondo J, Dulloo E, Turok J (eds)CABI Publishing, Wallingford, 2008: 549-555

25. Dunaeva S., Gavrilenko T. Collections of fruit and berry cultures in vitro (strategy of creation and storage). Research Bulletin of Applied Botany, Genetics and Plant Breeding , 2007. St.-Petersburg, V. 161, p. 10-19.

26. Gavrilenko T. (2007). Potato Cytogenetics. Chapter 10. In: Potato Biology and Biotechnology: Advances and Perspectives. Elsevier Science. Amsterdam, The Netherlands. Eds.: Vreugdenhil D., J.Bradshaw, C. Gebhardt, F. Govers,... H. Ross. Elsevier, 823 p., Amsterdam-Boston-…-Tokyo: 203-216.

27. Hijmans R. J., T. Gavrilenko, S. Stephenson, J. Bamberg, A. Salas, D. Spooner (2007). The geographic and environmental distribution of polyploidy in wild potatoes (Solanum section Petota). Global ecology and biogeography. vol.16, issue 4: 485–495.

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Appendix_S3

28. Gavrilenko T., Dunaeva S., Truskinov E., Antonova O., Pendinen G., Lupisheva J., Rogovaja V., N. Shvachko (2007). Strategy of long-term conservation of germplasm of vegetatively propagated crops under controlled conditions. 2008. Research Bulletin of Applied Botany, Genetics and Plant Breeding, 2007. St.-Petersburg, V. 164, p. 273-285.

29. Kiru S.D., T.A. Gavrilenko, L.I. Kostina, E.V. Rogozina, O.Y. Antonova, E.V. Truskinov, N.A. Shvachko, E.A. Krylova, A.B. Smirnova (2007). Conservation, evaluation and use in breeding of potato genetic diversity at the N.I. Vavilov institute of plant industy (VIR). (2007). In: Potato production and innovative technologies. Ed. by Haverkort A. S., Anisimov B. V. Wageningen Academic Publishers, The Netherlands, 2007. 353-363.

30. Gavrilenko T. A., O. Yu. Antonova, and L. I. Kostina (2007). Study of Genetic Diversity in Potato Cultivars Using PCR Analysis of Organelle DNA. Russian Journal of Genetics, 2007, Vol. 43, No. 11, pp. 1301–1305.

31. Antonova O.Yu., T.A. Gavrilenko (2006). Organelle DNA variation in potato species. Ecological Genetics, vol. IV, ?1, 3-10.

32. Dunaeva S., Kudryakova N., Malichev L., Lupyscheva Y., T. Gavrilenko (2005) In vitro Collection of Raspberries and Blackberries and Identification of Accessions by Isoenzyme Spectres.  Journal of Agrarian Russia. 2005. 2: 49-55.

33. Gavrilenko T. (2005). Contribution of protoplast fusion into improvement of crop plants. In: Identified plant genepool and breeding, Ed.: B.V. Rigin, 2005, St.-Petersburg, VIR, P.628-644.

34. Gavrilenko T., Antonova O., E. Rogozina (2005). Traditional and biotechnological approaches in breeding of virus resistant potatoes. In: Identified plant genepool and breeding, Ed.: B.V. Rigin, 2005, St.-Petersburg, VIR, P.644-662.

35. Anisimova I.N., Alpatieva N.V, Pendinen G.I., Antonova O.Y.., Gavrilova V.A., Chernov V.E. Molecular markers in investigations of genetic diversity of distant hybrids of plants. Agricultural Russia, 2005, ¹ 2, p. 4-13 (in Russian)

36. Pendinen G.I., Chernov V.E. Cytogenetic mechanisms for alien introgression of useful genes in cereals. In: Identified Plant Genepool and Breeding. S.-Petersburg. 2005. P.662-684. (in Russian)

37. Antonova O., Shvachko N., Kostina L., Malishev L., T. Gavrilenko (2004). Genetic differentiation of potato varieties using SSR markers. Journal of Agrarian Russia (Russ) ? 6, 2004, p.19-24.

38. Antonova O., Truskinov E., Frolova D., T. Gavrilenko (2004). Genetic stability of potato varieties under long-term stored in vitro conditions. Journal of Agrarian Russia (Russ) ? 6, 2004, p. 25-29.

39. Pendinen G.I., Alpatieva N.V., Chernov V.E., Anisimova I.N. Expression of seed storage protein genes in process of stabilization of Hordeum marinum (2x) x Triticum aestivum (6x) amphydiploid. Agricultural biology. 2004, N 5. P.53-58 (in Russian)

40. Antonova O., Kostina L., Gavrilenko T., Schuler K., R. Thieme (2003). Proof of long-term stored potato germplasm by use of molecular markers. In: Rudolf Mansfeld and Plant Genetic Resources. Proceedings of a symposium dedicated to the 100th birthday of Rudolf Mansfeld - 8-9 October 2001, Gatersleben, Germany. Knupffer H. & Ochsmann J. (Eds.), Schriften zu Genet. Ressourcen, Band 22: 192-197.

41. Gavrilenko T., Thieme R., Heimbach U., T. Thieme (2003). Genomic in situ hybridisation analysis of fertile somatic hybrids of Solanum etuberosum (+) dihaploid Solanum tuberosum and their backcrossing progenies: relationships of genome dosage with tuber development and resistance to potato virus Y. Euphytica, 131: 323-332.

42.Gavrilenko T., Larkka J., Pehu E., and V.-M. Rokka (2002). Identification of mitotic chromosomes of tuberous and non-tuberous Solanum species (Solanum tuberosum and Solanum brevidens) by GISH (genomic in situ hybridization) in their interspecific hybrids. Genome, 45: 442-449.

43. Gavrilenko T., Thieme R. and V.-M. Rokka (2001). Cytogenetic analysis of Lycopersicon esculentum (+) Solanum etuberosum somatic hybrids and their androgenic regenerants. Theoretical and Applied Genetics, 103: 231-239.

44. Gavrilenko T., Thieme R. and H. Tiemann (1999). Assessment of genetic and phenotypic variation in intraspecific potato somatic hybrids. Plant Breeding, 118, 205-213.

45. Solntseva M.P., Pendinen G.I. Postgamous incompatibility in crossess Hordeum marinum Huds.(4x) x H.vulgare L. (2x). Proceeding of Russian Academy of Sciences ( Dokladi Akademii Nauk). Ser. Cell Biology. 1999. V.368, N6. P.839-842.

46. Thieme R.,  Darsow U.,  Gavrilenko T., Dorokhov D., H. Tiemann (1997). Production of somatic hybrids between S. tuberosum L. and late blight resistant Mexican wild potato species. Euphytica, 97, 189-200.

47. Pendinen G.I., Chernov V.E. Characteristics of Interaction of Barley Hordeum depressum (Scribn.&Sm.)Ribd.(4x) with Genomes of rye Secale cereale L.(2x) and Barley Hordeum vulgare L.(2x) in Meiosis of F1 Hybrids. Russian Journal of Genetics. 1995. V.31. N 3. P.374-381.

48. Surikov I.M., Pendinen G.I. Interaction of Barley Hordeum vulgare L. And Rye Secale cereale L. Genomes with Gemomes og Different Wheat Species in Intergeneric Hybrids: Cytogenetic Characteristics. Russian Journal of Genetics. 1994. V.30. N 7. P.820-825.

49. Gavrilenko T., Dorokhov D., T. Nikulenkova (1994): Characteristics of intergeneric somatic hybrids of Lycopersicon esculentum Mill. and non-tuberous potato species of the Etuberosa series. Russian Journal of Genetics, (Russ), 30, 1388-1396.

50. Gavrilenko T., Nikulenkova T., I. Surikov (1994) Inheritance of morphogenetic potential of mesophyll protoplasts in hybrids between Solanum etuberosum Lindl. and Solanum brevidens Phil. Russian Journal of Genetics, (Russ), 30, 730-733.

51. Budin K. and T. Gavrilenko (1994). Genetic basis of remote hybridization in potato /Review/. Russian Journal of Genetics, (Russ), 30, 1225-1233.

52. Gavrilenko T., Barbakar N., A. Pavlov (1992). Somatic hybridization between Lycopersicon esculentum and non-tuberous  Solanum species of the Etuberosa series. Plant Science, 86, 203-204.

53. Vorobjeva G., Surikov I., Gavrilenko T., A. Pavlov (1992) Intergeneric sexual hybridization in tomato Lycopersicon esculentum Mill. and Solanum lycopersicoides Dun. Research Bulletin of Applied Botany, Genetics and Plant Breeding, 148, 45-52.

54. Chernov V.E., Pendinen G.I. Characteristic features of micropropagation in vitro of interspecific barley hybrids. Bulletin of applied botany, genetics and plant breeding, 1992, vol. 148. p.53-57.

55. Surikov I.M., Chernov V.E., Pendinen G.I. Using wild Hordeum species in interspecific crosses with cultivated barley. Bulletin of applied botany, genetics and plant breeding, 1992, vol. 148. p. 18-28.

56. Pendinen G.I. Charasteristic fearure of genome interaction of barley tetraploid forms of the series Marina nevski. And Rye Secale cereale in meiosis in barley-rye hybrids. Bulletin of applied botany, genetics and plant breeding, 1992, vol. 148. P.73-79.

57. Surikov I. and Gavrilenko T. (1990): Current problems of interspecific hybridization in tomatoes /Review/.  Agricultural Biology (Russ), 1, 37-50.

58. Pendinen G.I. Peculiarity of micropropagation in vitro of barley-wheat and wheat –rye hybrids. Bulletin of applied botany, genetics and plant breeding, 1987, vol. 128. P.39-45.

59. Surikov I., Gavrilenko T., Dunaeva S., Kissel N., V. Mazur (1986). On overcoming and using the plant interspecific incompatibility by in vitro methods. Agricultural Biology (Russ), 4, 3-